LISTSERV mailing list manager LISTSERV 16.5

Help for RAD-ANNOUNCEMENTS Archives


RAD-ANNOUNCEMENTS Archives

RAD-ANNOUNCEMENTS Archives


RAD-ANNOUNCEMENTS@LISTSERV.NEU.EDU


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

RAD-ANNOUNCEMENTS Home

RAD-ANNOUNCEMENTS Home

RAD-ANNOUNCEMENTS  February 2024

RAD-ANNOUNCEMENTS February 2024

Subject:

RADtool daily hits

From:

[log in to unmask]

Reply-To:

[log in to unmask]

Date:

Wed, 21 Feb 2024 11:17:49 -0500

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (67 lines)

RADTOOL DAILY CHECK RESULTS

This is an automated message generated by the RADtool server. Every day, the RCSB database is checked for any structures that contain long RNA chains. Below is a list of automatically-analyzed structures that were checked today. The RCSB IDs are given, as well as their initial designation (LSU-SSU, SSU only, LSU only, or unclassified). These are preliminary assignments. Each hit is manually verified before being added to the RAD database webpage at radtool.org. 

SUMMARY
19 RCSB IDs were checked. 2 did not appear to contain a ribosome.
There were 0 IDs for which downloading the structures failed.


TOTALS
LSUSSU: 1374 structures before and 1387 after checking
SSU   : 372 structures before and 374 after checking
LSU   : 530 structures before and 535 after checking

*********************************************************

NEW RIBOSOMES FOUND FOR THE FOLLOWING IDS

*********************************************************

Complete LSUSSU assemblies
8ip8
8ipa
8ipb
8oo0
8rd8
8rdv
8rdw
8ud6
8ud7
8ud8

Structures with only an SSU
8ip9
8jsg

Structures with only an LSU
8ohd
8oj0
8oj5
8oj8
8qfd


*********************************************************

STRUCTURES WITH LARGE RNA FRAGMENTS FOR WHICH RADTOOL
WAS UNABLE TO IDENTIFY A RIBOSOMAL SUBUNIT

*********************************************************

Structures that were downloaded but not found to have 
a ribosome. These may be partially assembled ribosomes,
or non-ribosomal systems.
8ony
8onz

Structures downloaded in cif format that were not found
to contain a ribosome. This is uncommon, but cif files 
are sometimes incompatible with VMD. 
none

########################################################################

To unsubscribe from the RAD-ANNOUNCEMENTS list, click the following link:
https://listserv.neu.edu/cgi-bin/wa?SUBED1=RAD-ANNOUNCEMENTS

Top of Message | Previous Page | Permalink

Advanced Options


Options

Log In

Log In

Get Password

Get Password


Search Archives

Search Archives


Subscribe or Unsubscribe

Subscribe or Unsubscribe


Archives

May 2024
April 2024
March 2024
February 2024
January 2024
December 2023
November 2023
October 2023
September 2023
August 2023
July 2023
June 2023
May 2023
April 2023
March 2023
February 2023
January 2023

ATOM RSS1 RSS2



LISTSERV.NEU.EDU

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager