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RAD-ANNOUNCEMENTS  June 2023

RAD-ANNOUNCEMENTS June 2023

Subject:

RADtool daily hits

From:

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Date:

Wed, 28 Jun 2023 11:26:01 -0400

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text/plain (68 lines)

RADTOOL DAILY CHECK RESULTS

This is an automated message generated by the RADtool server. Every day, the RCSB database is checked for any structures that contain long RNA chains. Below is a list of automatically-analyzed structures that were checked today. The RCSB IDs are given, as well as their initial designation (LSU-SSU, SSU only, LSU only, or unclassified). These are preliminary assignments. Each hit is manually verified before being added to the RAD database webpage at radtool.org. 

SUMMARY
17 RCSB IDs were checked. 0 did not appear to contain a ribosome.
There were 0 IDs for which downloading the structures failed.


TOTALS
LSUSSU: 1268 structures before and 1268 after checking
SSU   : 348 structures before and 348 after checking
LSU   : 455 structures before and 472 after checking

*********************************************************

NEW RIBOSOMES FOUND FOR THE FOLLOWING IDS

*********************************************************

Complete LSUSSU assemblies
none

Structures with only an SSU
none

Structures with only an LSU
8e30
8e32
8e33
8e35
8e36
8e3l
8e3m
8e3o
8e41
8e42
8e43
8e44
8e45
8e46
8e47
8e48
8e49


*********************************************************

STRUCTURES WITH LARGE RNA FRAGMENTS FOR WHICH RADTOOL
WAS UNABLE TO IDENTIFY A RIBOSOMAL SUBUNIT

*********************************************************

Structures that were downloaded but not found to have 
a ribosome. These may be partially assembled ribosomes,
or non-ribosomal systems.
none

Structures downloaded in cif format that were not found
to contain a ribosome. This is uncommon, but cif files 
are sometimes incompatible with VMD. 
none

########################################################################

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