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RAD-ANNOUNCEMENTS  April 2023

RAD-ANNOUNCEMENTS April 2023

Subject:

RADtool daily hits

From:

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Date:

Wed, 19 Apr 2023 11:15:57 -0400

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text/plain (63 lines)

RADTOOL DAILY CHECK RESULTS

This is an automated message generated by the RADtool server. Every day, the RCSB database is checked for any structures that contain long RNA chains. Below is a list of automatically-analyzed structures that were checked today. The RCSB IDs are given, as well as their initial designation (LSU-SSU, SSU only, LSU only, or unclassified). These are preliminary assignments. Each hit is manually verified before being added to the RAD database webpage at radtool.org. 

SUMMARY
12 RCSB IDs were checked. 0 did not appear to contain a ribosome.
There were 0 IDs for which downloading the structures failed.


TOTALS
LSUSSU: 1247 structures before and 1259 after checking
SSU   : 341 structures before and 341 after checking
LSU   : 440 structures before and 440 after checking

*********************************************************

NEW RIBOSOMES FOUND FOR THE FOLLOWING IDS

*********************************************************

Complete LSUSSU assemblies
7uvv
7uvw
7uvx
7uvy
7uvz
7uw1
8g5y
8g5z
8g60
8g61
8g6j
8glp

Structures with only an SSU
none

Structures with only an LSU
none


*********************************************************

STRUCTURES WITH LARGE RNA FRAGMENTS FOR WHICH RADTOOL
WAS UNABLE TO IDENTIFY A RIBOSOMAL SUBUNIT

*********************************************************

Structures that were downloaded but not found to have 
a ribosome. These may be partially assembled ribosomes,
or non-ribosomal systems.
none

Structures downloaded in cif format that were not found
to contain a ribosome. This is uncommon, but cif files 
are sometimes incompatible with VMD. 
none

########################################################################

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