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RAD-ANNOUNCEMENTS  January 2023

RAD-ANNOUNCEMENTS January 2023

Subject:

RADtool daily hits

From:

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Date:

Fri, 20 Jan 2023 11:32:20 -0500

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text/plain (52 lines)

RADTOOL DAILY CHECK RESULTS

This is an automated message generated by the RADtool server. Every day, the RCSB database is checked for any structures that contain long RNA chains. Below is a list of automatically-analyzed structures that were checked today. The RCSB IDs are given, as well as their initial designation (LSU-SSU, SSU only, LSU only, or unclassified). These are preliminary assignments. Each hit is manually verified before being added to the RAD database webpage at radtool.org. 

SUMMARY
1 RCSB IDs were checked. 0 did not appear to contain a ribosome
There were 0 IDs for which downloading the structures failed.


TOTALS
LSUSSU: 1216 structures before and 1216 after checking
SSU   : 339 structures before and 339 after checking
LSU   : 401 structures before and 402 after checking

*********************************************************

NEW RIBOSOMES FOUND FOR THE FOLLOWING IDS

*********************************************************

Complete LSUSSU assemblies
none

Structures with only an SSU
none

Structures with only an LSU
7qq3


*********************************************************

STRUCTURES WITH LARGE RNA FRAGMENTS FOR WHICH RADTOOL
WAS UNABLE TO IDENTIFY A RIBOSOMAL SUBUNIT

*********************************************************

Structures that were downloaded but not found to have 
a ribosome. These may be partially assembled ribosomes,
or non-ribosomal systems.
none

Structures downloaded in cif format that were not found
to contain a ribosome. This is uncommon, but cif files 
are sometimes incompatible with VMD. 
none

########################################################################

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