Print

Print


RADTOOL DAILY CHECK RESULTS

This is an automated message generated by the RADtool server. Every day, the RCSB database is checked for any structures that contain long RNA chains. Below is a list of automatically-analyzed structures that were checked today. The RCSB IDs are given, as well as their initial designation (LSU-SSU, SSU only, LSU only, or unclassified). These are preliminary assignments. Each hit is manually verified before being added to the RAD database webpage at radtool.org. 

SUMMARY
10 RCSB IDs were checked. 2 did not appear to contain a ribosome.
There were 0 IDs for which downloading the structures failed.


TOTALS
LSUSSU: 1225 structures before and 1228 after checking
SSU   : 340 structures before and 340 after checking
LSU   : 416 structures before and 421 after checking

*********************************************************

NEW RIBOSOMES FOUND FOR THE FOLLOWING IDS

*********************************************************

Complete LSUSSU assemblies
8br8
8brm
8bsi

Structures with only an SSU
none

Structures with only an LSU
7uoo
7uqb
7uqz
7v08
8cvm


*********************************************************

STRUCTURES WITH LARGE RNA FRAGMENTS FOR WHICH RADTOOL
WAS UNABLE TO IDENTIFY A RIBOSOMAL SUBUNIT

*********************************************************

Structures that were downloaded but not found to have 
a ribosome. These may be partially assembled ribosomes,
or non-ribosomal systems.
8cvo
8cwo

Structures downloaded in cif format that were not found
to contain a ribosome. This is uncommon, but cif files 
are sometimes incompatible with VMD. 
none

########################################################################

To unsubscribe from the RAD-ANNOUNCEMENTS list, click the following link:
https://listserv.neu.edu/cgi-bin/wa?SUBED1=RAD-ANNOUNCEMENTS